New 3-D Earth Model More Accurately Pinpoints Source of Earthquakes, Explosions

During the Cold War, U.S. and international monitoring agencies could spot nuclear tests and focused on measuring their sizes. Today, they’re looking around the globe to pinpoint much smaller explosives tests.

Under the sponsorship of the National Nuclear Security Administration’s Office of Defense Nuclear Nonproliferation R&D, Sandia National Laboratories and Los Alamos National Laboratory have partnered to develop a 3-D model of the Earth’s mantle and crust called SALSA3D, or Sandia-Los Alamos 3D. The purpose of this model is to assist the U.S. Air Force and the international Comprehensive Nuclear-Test-Ban Treaty Organization (CTBTO) in Vienna, Austria, more accurately locate all types of explosions.

Sandia National Laboratories researcher Sandy Ballard and colleagues from Sandia and Los Alamos National Laboratory have developed SALSA3D, a 3-D model of the Earth’s mantle and crust designed to help pinpoint the location of all types of explosions. (Credit: Randy Montoya)

Sandia National Laboratories researcher Sandy Ballard and colleagues from Sandia and Los Alamos National Laboratory have developed SALSA3D, a 3-D model of the Earth’s mantle and crust designed to help pinpoint the location of all types of explosions. (Credit: Randy Montoya)

The model uses a scalable triangular tessellation and seismic tomography to map the Earth’s “compressional wave seismic velocity,” a property of the rocks and other materials inside the Earth that indicates how quickly compressional waves travel through them and is one way to accurately locate seismic events, Sandia geophysicist Sandy Ballard said. Compressional waves — measured first after seismic events — move the particles in rocks and other materials minute distances backward and forward between the location of the event and the station detecting it.

SALSA3D also reduces the uncertainty in the model’s predictions, an important feature for decision-makers who must take action when suspicious activity is detected, he added.

“When you have an earthquake or nuclear explosion, not only do you need to know where it happened, but also how well you know that. That’s a difficult problem for these big 3-D models. It’s mainly a computational problem,” Ballard said. “The math is not so tough, just getting it done is hard, and we’ve accomplished that.”

A Sandia team has been writing and refining code for the model since 2007 and is now demonstrating SALSA3D is more accurate than current models.

In recent tests, SALSA3D was able to predict the source of seismic events over a geographical area that was 26 percent smaller than the traditional one-dimensional model and 9 percent smaller than a recently developed Regional Seismic Travel Time (RSTT) model used with the one-dimensional model.

GeoTess software release

Sandia recently released SALSA3D’s framework — the triangular tessellated grid on which the model is built — to other Earth scientists, seismologists and the public. By standardizing the framework, the seismological research community can more easily share models of the Earth’s structure and global monitoring agencies can better test different models. Both activities are hampered by the plethora of models available today, Ballard said. (See box.)

“GeoTess makes models compatible and standardizes everything,” he said. “This would really facilitate sharing of different models, if everyone agreed on it.”

Seismologists and researchers worldwide can now download GeoTess, which provides a common model parameterization for multidimensional Earth models and a software support system that addresses the construction, population, storage and interrogation of data stored in the model. GeoTess is not specific to any particular data, so users have considerable flexibility in how they store information in the model. The free package, including source code, is being released under the very liberal BSD Open Source License. The code is available in Java and C++, with interfaces to the C++ version written in C and Fortran90. GeoTess has been tested on multiple platforms, including Linux, SunOS, MacOSX and Windows.

When an explosion goes off, the energy travels through the Earth as waves that are picked up by seismometers at U.S. and international ground monitoring stations associated with nuclear explosion monitoring organizations worldwide. Scientists use these signals to determine the location.

They first predict the time taken for the waves to travel from their source through the Earth to each station. To calculate that, they have to know the seismic velocity of the Earth’s materials from the crust to the inner core, Ballard said.

“If you have material that has very high seismic velocity, the waves travel very quickly, but the energy travels less quickly through other kinds of materials, so it takes the signals longer to travel from the source to the receiver,” he says.

For the past 100 years, seismologists have predicted the travel time of seismic energy from source to receiver using one-dimensional models. These models, which are still widely used today, account only for radial variations in seismic velocity and ignore variations in geographic directions. They yield seismic event locations that are reasonably accurate, but not nearly as precise as locations calculated with high fidelity 3-D models.

Modern 3-D models of the Earth, like SALSA3D, account for distortions of the seismic wavefronts caused by minor lateral differences in the properties of rocks and other materials.

For example, waves are distorted when they move through a geological feature called a subduction zone, such as the one beneath the west coast of South America where one tectonic plate under the Pacific Ocean is diving underneath the Andes Mountains. This happens at about the rate at which fingernails grow, but, geologically speaking, that’s fast, Ballard said.

One-dimensional models, like the widely used ak135 developed in the 1990s, are good at predicting the travel time of waves when the distance from the source to the receiver is large because these waves spend most of their time traveling through the deepest, most homogenous parts of the Earth. They don’t do so well at predicting travel time to nearby events where the waves spend most of their time in the Earth’s crust or the shallowest parts of the mantle, both of which contain a larger variety of materials than the lower mantle and the Earth’s core.

RSTT, a previous model developed jointly by Sandia, Los Alamos and Lawrence Livermore national laboratories, tried to solve that problem and works best at ranges of about 60-1,200 miles (100-2,000 kilometers).

Still, “the biggest errors we get are close to the surface of the Earth. That’s where the most variability in materials is,” Ballard said.

Seismic tomography gives SALSA3D accuracy

Today, Earth scientists are mapping three dimensions: the radius, latitude and longitude.

Anyone who’s studied a globe or world atlas knows that the traditional grid of longitudinal and latitudinal lines work all right the closer you are to the equator, but at the poles, the lines are too close together. For nuclear explosion monitoring, Earth models must accurately characterize the polar regions even though they are remote because seismic waves travel under them, Ballard said.

Triangular tessellation solves that with nodes, or intersections of the triangles, that can be accurately modeled even at the poles. The triangles can be smaller where more detail is needed and larger in areas that require less detail, like the oceans. Plus the model extends into the Earth like columns of stacked pieces of pie without the rounded crust edges.

The way Sandia calculates the seismic velocities uses the same math that is used to detect a tumor in an MRI, except on a global, rather than a human, scale.

Sandia uses historical data from 118,000 earthquakes and 13,000 current and former monitoring stations worldwide collected by Los Alamos Lab’s Ground Truth catalog.

“We apply a process called seismic tomography where we take millions of observed travel times and invert them for the seismic velocities that would create that data set. It’s mathematically similar to doing linear regression, but on steroids,” Sandy says. Linear regression is a simple mathematical way to model the relationship between a known variable and one or more unknown variables. Because the Sandia team models hundreds of thousands of unknown variables, they apply a mathematical method called least squares to minimize the discrepancies between the data from previous seismic events and the predictions.

With 10 million data points, Sandia uses a distributed computer network with about 400 core processors to characterize the seismic velocity at every node.

Monitoring agencies could use SALSA3D to precompute the travel time from each station in their network to every point on Earth. When it comes time to compute the location of a new seismic event in real-time, source-to-receiver travel times can be computed in a millisecond and pinpoint the energy’s source in about a second, he said.

Uncertainty modeling a SALSA3D feature

But no model is perfect, so Sandia has developed a way to measure the uncertainty in each prediction SALSA3D makes, based on uncertainty in the velocity at each node and how that uncertainty affects the travel time prediction of each wave from a seismic event to each monitoring station.

SALSA3D estimates for the users at monitoring stations the most likely location of a seismic event and the amount of uncertainty in the answer to help inform their decisions.

International test ban treaties require that on-site inspections can only occur within a 1,000-square-kilometer (385-square-mile) area surrounding a suspected nuclear test site. Today, 3-D Earth models like SALSA3D are helping to meet and sometimes significantly exceed this threshold in most parts of the world.

“It’s extremely difficult to do because the problem is so large,” Ballard said. “But we’ve got to know it within 1,000 square kilometers or they might search in the wrong place.”

Computer Simulations Indicate Calcium Carbonate Has a Dense Liquid Phase

Computer simulations conducted at the U.S. Department of Energy’s Lawrence Berkeley National Laboratory (Berkeley Lab) could help scientists make sense of a recently observed and puzzling wrinkle in one of nature’s most important chemical processes. It turns out that calcium carbonate — the ubiquitous compound that is a major component of seashells, limestone, concrete, antacids and myriad other naturally and industrially produced substances — may momentarily exist in liquid form as it crystallizes from solution.

Calcium carbonate is a huge player in the planet’s carbon cycle, so any new insight into how it behaves is potentially big news. The prediction of a dense liquid phase during the conversion of calcium carbonate to a solid could help scientists understand the response of marine organisms to changes in seawater chemistry due to rising atmospheric CO2 levels. It could also help them predict the extent to which geological formations can act as carbon storage reservoirs, among other examples.

Artistic rendition of liquid-liquid separation in a supersaturated calcium carbonate solution. New research suggests that a dense liquid phase (shown in red in the background and in full atomistic detail based on computer simulations in the foreground) forms at the onset of calcium carbonate crystallization. (Credit: Berkeley Lab)

Artistic rendition of liquid-liquid separation in a supersaturated calcium carbonate solution. New research suggests that a dense liquid phase (shown in red in the background and in full atomistic detail based on computer simulations in the foreground) forms at the onset of calcium carbonate crystallization. (Credit: Berkeley Lab)

The research is published in the August 23 issue of the journal Science. It was performed in support of the Center for Nanoscale Control of Geologic CO2, an Energy Frontier Research Center established at Berkeley Lab by the U.S. Department of Energy.

The research may also reconcile some confounding experimental observations. For more than a century, scientists believed that crystals nucleate from solution by overcoming an energy barrier. But recent studies of calcium carbonate revealed the presence of nanoscopic clusters which, under certain conditions, appear to circumvent the barrier by following an alternative aggregation-based crystallization pathway.

“Because nucleation is ubiquitous in both natural and synthetic systems, those findings have forced diverse scientific communities to reevaluate their longstanding view of this process,” says the study’s co-corresponding author Jim De Yoreo, formerly of Berkeley Lab and now a scientist at Pacific Northwest National Laboratory.

The Berkeley Lab-led team used molecular dynamics simulations to study the onset of calcium carbonate formation. The simulations predict that in sufficiently supersaturated calcium carbonate solutions, nanoscale dense liquid droplets can spontaneously form. These droplets then coalesce to form an amorphous solid prior to crystallization.

The findings support the aggregation-based mechanism of calcium carbonate formation. They also indicate that the presence of the nanoscale phase is consistent with a process called liquid-liquid separation, which is well known in alloys and polymers, but unexpected for salt solutions.

“Our simulations suggest the existence of a dense liquid form of calcium carbonate,” says co-corresponding author Adam Wallace. He conducted the research while a post-doctoral researcher in Berkeley Lab’s Earth Sciences Division, and is now an assistant professor in the Department of Geological Sciences at the University of Delaware.

“This is important because it is an as-yet unappreciated component of the carbon cycle,” adds Wallace. “It also provides a means of explaining the unusual presence of nanoscale clusters in solution within the context of established physical mechanisms.”

This research was supported by the U.S. Department of Energy’s Office of Science through the Energy Frontier Research Center program established in 2009. The work was conducted at Berkeley Lab’s Molecular Foundry, a Department of Energy national user facility. The research also used resources of the Department of Energy’s National Energy Research Scientific Computing Center, which is located at Berkeley Lab.

New Bird Fossil Hints at More Undiscovered Chinese Treasures

The study of Mesozoic birds and the dinosaur-bird transition is one of the most exciting and vigorous fields in vertebrate paleontology today. A newly described bird from the Jehol Biota of northeast China suggests that scientists have only tapped a small proportion of the birds and dinosaurs that were living at that time, and that the rocks still have many secrets to reveal.

“The study of Mesozoic birds is currently one of the most exciting fields; new discoveries continue to drastically change how we view them,” said Jingmai O’Connor, lead author of the study. The article appeared in the March issue of the Journal of Vertebrate Paleontology.

Life reconstruction of Longicrusavis houi in what was probably its favored habitat, shallow lake waters. A reconstruction of the fossil specimen itself is reflected in the water. (Credit: Illustration by Stephanie Abramowicz, Dinosaur Institute, Natural History Museum of Los Angeles County.)

Life reconstruction of Longicrusavis houi in what was probably its favored habitat, shallow lake waters. A reconstruction of the fossil specimen itself is reflected in the water. (Credit: Illustration by Stephanie Abramowicz, Dinosaur Institute, Natural History Museum of Los Angeles County.)

The new bird, named “Longicrusavis houi,” belongs to a group of birds known as ornithuromorphs (Ornithuromorpha), which are rare in rocks of this age. Ornithuromorphs are more closely related to modern birds than are most of the other birds from the Jehol Biota.

Longicrusavis adds to the magnificent diversity of ancient birds, many of them sporting teeth, wing claws, and long bony tails, that recently have been unearthed from northeastern China,” said Luis Chiappe, a co-author of the study.

Along with a bird described five years ago, Longicrusavis provides evidence for a new, specialized group of small birds that diversified during the Early Cretaceous between about 130 and 120 million years ago.

“The new discovery adds information not only on the diversity these birds, but also on the possible lakeshore environment in which this bird lived,” said co-author Gao Ke-Qin.

The legs of this new species are unusually long, suggesting that it spent much of its time wading in the shallows of ancient lakes. The name “Longicrusavis” means “long-shin bird,” highlighting this important aspect of the new specimen. The presence of ancient birds in this habitat suggests that modern birds might have originated from an ancestor that was adapted for life near rivers and lakes.

Previously undescribed feather impressions from a closely related species suggest that both it and Longicrusavis had a long, fan-shaped tail. These are the oldest species to have such a tail, which likely increased flying performance.

The rocks of the Yixian Formation of northeast China have produced a spectacular array of fossils in recent years including fishes, birds, mammals, invertebrates, and dinosaurs. These fossils are collectively are known as the Jehol Biota and they are remarkable because, in many instances, they preserve soft tissues such as feathers or hair in addition to teeth and bones.

“The Jehol Biota never fails to stop giving, and the research to be done on these fossils is virtually endless!” said O’Connor.

Rising Mountains, Cooling Oceans Prompted Spread of Invasive Species 450 Million Years Ago

New Ohio University research suggests that the rise of an early phase of the Appalachian Mountains and cooling oceans allowed invasive species to upset the North American ecosystem 450 million years ago.

The study, published recently in the journal PLOS ONE, took a closer look at a dramatic ecological shift captured in the fossil record during the Ordovician period. Ohio University scientists argue that major geological developments triggered evolutionary changes in the ancient seas, which were dominated by organisms such as brachiopods, corals, trilobites and crinoids.

During this period, North America was part of an ancient continent called Laurentia that sat near the equator and had a tropical climate. Shifting of Earth’s tectonic plates gave rise to the Taconic Mountains, which were forerunners of the Appalachian Mountains. The geological shift left a depression behind the mountain range, flooding the area with cool water from the surrounding deep ocean.

New Ohio University research suggests that the rise of an early phase of the Appalachian Mountains and cooling oceans allowed invasive species to upset the North American ecosystem 450 million years ago. The study, published in the journal PLOS ONE, took a closer look at a dramatic ecological shift captured in the fossil record during the Ordovician period. Ohio University scientists argue that major geological developments triggered evolutionary changes in the ancient seas, which were dominated by organisms such as brachiopods, corals, trilobites and crinoids. This image shows one of the brachiopods under study, Glyptorthis. (Credit: David Wright)

New Ohio University research suggests that the rise of an early phase of the Appalachian Mountains and cooling oceans allowed invasive species to upset the North American ecosystem 450 million years ago. The study, published in the journal PLOS ONE, took a closer look at a dramatic ecological shift captured in the fossil record during the Ordovician period. Ohio University scientists argue that major geological developments triggered evolutionary changes in the ancient seas, which were dominated by organisms such as brachiopods, corals, trilobites and crinoids. This image shows one of the brachiopods under study, Glyptorthis. (Credit: David Wright)

Scientists knew that there was a massive influx of invasive species into this ocean basin during this time period, but didn’t know where the invaders came from or how they got a foothold in the ecosystem, said Alycia Stigall, an Ohio University associate professor of geological sciences who co-authored the paper with former Ohio University graduate student David Wright, now a doctoral student at Ohio State University.

“The rocks of this time record a major oceanographic shift, pulse of mountain building and a change in evolutionary dynamics coincident with each other,” Stigall said. “We are interested in examining the interactions between these factors.”

Using the fossils of 53 species of brachiopods that dominated the Laurentian ecosystem, Stigall and Wright created several phylogenies, or trees of reconstructed evolutionary relationships, to examine how individual speciation events occurred.

The invaders that proliferated during this time period were species within the groups of animals that inhabited Laurentia, Stigall explained. Within the brachiopods, corals and cephalopods, for example, some species are invasive and some are not.

As the geological changes slowly played out over the course of a million years, two patterns of survival emerged, the scientists report.

During the early stage of mountain building and ocean cooling, the native organisms became geographically divided, slowly evolving into different species suited for these niche habitats. This process, called vicariance, is the typical method by which new species originate on Earth, Stigall said.

As the geological changes progressed, however, species from other regions of the continent began to directly invade habitats, a process called dispersal. Although biodiversity may initially increase, this process decreases biodiversity in the long term, Stigall explained, because it allows a few aggressive species to populate many sites quickly, dominating those ecosystems.

This is the second time that Stigall and her team have found this pattern of speciation in the geological record. A study published in 2010 on the invasive species that prompted a mass extinction during the Devonian period about 375 million years ago also discovered a shift from vicariance to dispersal that contributed to a decline in biodiversity, Stigall noted.

It’s a pattern that’s happening during our modern biodiversity crisis as well, she said.

“Only one out of 10 invaders truly become invasive species. Understanding the process can help determine where to put conservation resources,” she said.

Ancient Cycads Found to Be Pre-Adapted to Grow in Groves

The ancient cycad lineage has been around since before the age of the dinosaurs. More recently, cycads also co-existed with large herbivorous mammals, such as the ice age megafauna that only went extinct a few tens of thousands of years ago. Cycads that are living today have large, heavy seeds with a fleshy outer coating that suggests they rely on large bodied fruit-eating animals to disperse their seeds. Yet there is little evidence that they are eaten and dispersed by today’s larger-bodied animals, such as emus or elephants. If these plants are adapted for dispersal by a set of animals that has been missing from Earth’s fauna for tens of thousands of years, then how can they still be around today? A new study proposes that the clumped dispersal mechanism these ancient plants most likely relied upon still serves them well today.

The biotic soil crust in Red Rock Canyon, Lake Mead National Recreation Area, NV is showing clumps of the dominant moss species, Syntrichia caninervis. Each black dot represents a separate plant. This extreme arid-dwelling moss inhabits the loose sandy soils of the Mojave Desert. The peculiar characteristic about this dioecious species is that it often does not develop sex organs if temperatures are too high and moisture is too low. These clumps, which should have a 50/50 ratio of females to males, are sexless. However, the female phenotype is heartier and when sex organs do develop they are usually female. Delving into the population impacts of lack of sex organ development and skewed sex ratios in S. caninervis, Paasch et al. assessed the standing genetic diversity of this species at four sites in the Mojave Desert. What they found was surprising. This sexually stunted species is maintaining a high number of genotypes and high genetic diversity, even under stressful environmental conditions and at sites with a complete lack of sexually developed individuals. (Credit: Alexis Wartelle)

The biotic soil crust in Red Rock Canyon, Lake Mead National Recreation Area, NV is showing clumps of the dominant moss species, Syntrichia caninervis. Each black dot represents a separate plant. This extreme arid-dwelling moss inhabits the loose sandy soils of the Mojave Desert. The peculiar characteristic about this dioecious species is that it often does not develop sex organs if temperatures are too high and moisture is too low. These clumps, which should have a 50/50 ratio of females to males, are sexless. However, the female phenotype is heartier and when sex organs do develop they are usually female. Delving into the population impacts of lack of sex organ development and skewed sex ratios in S. caninervis, Paasch et al. assessed the standing genetic diversity of this species at four sites in the Mojave Desert. What they found was surprising. This sexually stunted species is maintaining a high number of genotypes and high genetic diversity, even under stressful environmental conditions and at sites with a complete lack of sexually developed individuals. (Credit: Alexis Wartelle)

Fossil cycads are recorded from 280 million years ago around the time coniferous forests first arose. The ecological distribution pattern of many living cycads today suggests they have limited and ineffectual seed dispersal. For example, Macrozamia miquelii, a cycad endemic to Australia, is found in highly clumped, dense, numbers, where it dominates the understory. Moreover, large areas of seemingly suitable habitat often separate populations from each other. These patterns suggest that few to none of the seeds are being dispersed large distances away from parent plants, one of the long-standing tenets of the advantages of seed dispersal.

John Hall and Gimme Walter (University of Queensland, Australia) were interested in determining whether the seed dispersal and seedling distribution pattern of M. miquelii might indicate that it is maladapted to its current dispersers. They proposed a new twist on the functional significance of the megafaunal dispersal syndrome and published their findings recently in the American Journal of Botany.

“Naturalists are very comfortable with the idea of animals gaining a biological advantage by choosing to live together in high density ‘colonies’ — such as ant nests or seabird rookeries — in certain parts of the landscape,” notes Hall. “But when it comes to plants, there is a bit of a subconscious assumption that the purpose of seed dispersal is to simply spread seeds as far and as evenly as possible across the broadest possible area.”

Hall and Walter decided to investigate whether cycads might be a type of plant that forms such colonies. “The main idea behind our research,” Hall clarifies, “is to ask the question: when it comes to the spatial ecology of plants, could it be useful to think of some plant species as also forming and maintaining ‘colonies’ or ‘groves’ in the wider landscape?”

“Australian cycads once co-existed with megafauna that could have dispersed their large, heavy seeds — such as giant ground birds, bigger then present day emus, and Diprotodon, a rhino sized marsupial quadruped,” explains Hall. “The large, heavy and poisonous seeds, surrounded by a fleshy and non-toxic fruit-like layer, seem well adapted to being occasionally swallowed whole en masse by megafauna, which would then pass the many seeds simultaneously at a new location: the genesis of a new grove.”

Female cycads produce one to two cones that contain multiple, large seeds, each covered with a thin outer fleshy sarcotesta. By tagging ten large seeds from the single cone of 12 plants with a small steel bolt, the authors were able to track how many of the seeds were removed from the parent cycad and how far the seeds were dispersed.

They found that within three months virtually all of the seeds had their sarcostesta eaten — primarily by brushtailed opposums, which scrape the flesh off and discard the large seeds. Camera traps at two fruiting females and hair traps baited with seeds confirmed the disperser identity. However, almost all (97%) of the tagged seeds that the authors recovered had been moved less than one meter away; only a few were moved beyond the vicinity of the parent plant and in all cases they were found less than 5 meters away.

Moreover, although most of the seeds ended up under the parent cycad, almost no seedlings were found within a 1.5 m radius of adult cycads, suggesting that most seeds within the vicinity of the parent perish.

These patterns suggest that despite their large seed size, the primary dispersers of these cycads today are smaller bodied animals; these animals do not spread the seeds far and wide, nor take them to potentially new colonizable habitats. Yet, these plants seem to be doing well by sprouting up near the adults and forming mono-dominant stands.

“Since their potential Australian prehistoric megafaunal dispersers became extinct around 45,000 years ago, why haven’t Australian cycads begun to evolve smaller seeds, that would be more readily dispersed by flying birds or possums for example, over the interim?” posits Hall.

“We argue that the answer to this question is that cycads are actually disadvantaged by dispersing as lone individuals that may travel long distances, but in so doing so, become isolated from others of their kind,” Hall states.

Moreover, Hall points out that cycad plants are all born either male or female, and rely completely on host specific insect pollinators — so a lone cycad that dispersed a long way from others of its kind would probably be disadvantaged rather than advantaged in terms of reproduction.

Thus, if cycads evolved to be dispersed by large-bodied frugivores, these animals would most likely have deposited many cycads seeds in their dung at once, and thus these plants may be adapted to grow in groves — an aspect that plays to their favor today, despite the loss of these megafauna dispersers.

“There’s no doubt that cycad ancestors were contemporary with herbivorous dinosaurs for many hundreds of millions of years, so it’s plausible that cycad seed dispersal ecology and “colony forming” behavior may be extremely ancient, and echo the ecology of dinosaur-plant interaction” he concludes, “but of course we now enter into the realm of speculation.”

Hall’s interest in the spatial ecology of ‘colony’ forming plants does not stop at cycads; he is currently planning to explore these ideas in other plants and landscapes, especially in forest understories.

Extinct Ancient Ape Did Not Walk Like a Human, Study Shows

According to a new study, led by University of Texas at Austin anthropologists Gabrielle A. Russo and Liza Shapiro, a 9- to 7-million-year-old ape from Italy did not, in fact, walk habitually on two legs. The findings refute a long body of evidence, suggesting that Oreopithecus had the capabilities for bipedal (moving on two legs) walking.

The study, published in a forthcoming issue of the Journal of Human Evolution, confirms that anatomical features related to habitual upright, two-legged walking remain exclusively associated with humans and their fossil ancestors.

“Our findings offer new insight into the Oreopithecus locomotor debate,” says Russo, who is currently a postdoctoral research fellow at Northeast Ohio Medical University. “While it’s certainly possible that Oreopithecus walked on two legs to some extent, as apes are known to employ short bouts of this activity, an increasing amount of anatomical evidence clearly demonstrates that it didn’t do so habitually.”

As part of the study, the researchers analyzed the fossil ape to see whether it possessed lower spine anatomy consistent with bipedal walking. They compared measurements of its lumbar vertebrae (lower back) and sacrum (a triangular bone at the base of the spine) to those of modern humans, fossil hominins (extinct bipedal human ancestors), and a sample of mammals that commonly move around in trees, including apes, sloths and an extinct lemur.

According to a new study, led by University of Texas at Austin anthropologists Gabrielle A. Russo and Liza Shapiro, a 9- to 7-million-year-old ape from Italy did not, in fact, walk habitually on two legs. The findings refute a long body of evidence, suggesting that Oreopithecus had the capabilities for bipedal (moving on two legs) walking. Share This: 73  The study, published in a forthcoming issue of the Journal of Human Evolution, confirms that anatomical features related to habitual upright, two-legged walking remain exclusively associated with humans and their fossil ancestors.  "Our findings offer new insight into the Oreopithecus locomotor debate," says Russo, who is currently a postdoctoral research fellow at Northeast Ohio Medical University. "While it's certainly possible that Oreopithecus walked on two legs to some extent, as apes are known to employ short bouts of this activity, an increasing amount of anatomical evidence clearly demonstrates that it didn't do so habitually."  As part of the study, the researchers analyzed the fossil ape to see whether it possessed lower spine anatomy consistent with bipedal walking. They compared measurements of its lumbar vertebrae (lower back) and sacrum (a triangular bone at the base of the spine) to those of modern humans, fossil hominins (extinct bipedal human ancestors), and a sample of mammals that commonly move around in trees, including apes, sloths and an extinct lemur.  The lower spine serves as a good basis for testing the habitual bipedal locomotion hypothesis because human lumbar vertebrae and sacra exhibit distinct features that facilitate the transmission of body weight for habitual bipedalism, says Russo.  According to the findings, the anatomy of Oreopithecus lumbar vertebrae and sacrum is unlike that of humans, and more similar to apes, indicating that it is incompatible with the functional demands of walking upright as a human does.  "The lower spine of humans is highly specialized for habitual bipedalism, and is therefore a key region for assessing whether this uniquely human form of locomotion was present in Oreopithecus," says Shapiro, a professor of anthropology. "Previous debate on the locomotor behavior of Oreopithecus had focused on the anatomy of the limbs and pelvis, but no one had reassessed the controversial claim that its lower back was human-like."

The lower spine serves as a good basis for testing the habitual bipedal locomotion hypothesis because human lumbar vertebrae and sacra exhibit distinct features that facilitate the transmission of body weight for habitual bipedalism, says Russo.

According to the findings, the anatomy of Oreopithecus lumbar vertebrae and sacrum is unlike that of humans, and more similar to apes, indicating that it is incompatible with the functional demands of walking upright as a human does.

“The lower spine of humans is highly specialized for habitual bipedalism, and is therefore a key region for assessing whether this uniquely human form of locomotion was present in Oreopithecus,” says Shapiro, a professor of anthropology. “Previous debate on the locomotor behavior of Oreopithecus had focused on the anatomy of the limbs and pelvis, but no one had reassessed the controversial claim that its lower back was human-like.”

Ancient Mammal Relatives Cast Light On Recovery After Mass Extinction

As growing numbers of species in the modern world face extinction because of global climate change, habitat destruction, and over-exploitation, scientists have turned to the fossil record to understand how mass extinctions in the past proceeded, and how species and ecosystems recovered in the aftermath of such events.

Much work so far suggests that the survivors of mass extinctions often are presented with new ecological opportunities because the loss of many species in their communities allows them to evolve new lifestyles and new anatomical features as they fill the roles vacated by the victims.

Reconstruction of the Permian anomodont Dicynodon lacerticeps. (Credit: Marlene Donnelly, Field Museum of Natural History)

Reconstruction of the Permian anomodont Dicynodon lacerticeps. (Credit: Marlene Donnelly, Field Museum of Natural History)

However, it turns out that not all survivors respond in the same way, and some may not be able to exploit fully the new opportunities arising after a mass extinction. A team of researchers from the University of Lincoln, the Field Museum of Natural History in Chicago, the Museum für Naturkunde in Berlin, and the University of Bristol examined how a group of ancient relatives of mammals called anomodonts responded in the aftermath of the largest mass extinction in Earth history. Their work, published this week in Proceedings of the Royal Society B and titled “Decoupling of morphological disparity and taxic diversity during the adaptive radiation of anomodont therapsids,” shows that anomodonts remained anatomically conservative even as the number of species rebounded during the recovery.

The mass extinction at the end of the Permian Period, about 252 million years ago, had profound effects on organisms on land and in the sea, with as many as 90% of marine organisms and 70% of terrestrial species becoming extinct. “Groups of organisms that survive such a mass extinction are said to have passed through an evolutionary bottleneck analogous to the genetic bottleneck that may occur in a population if many of its members die off,” said Dr. Marcello Ruta of the University of Lincoln, the lead author of the study. “At the population level, a genetic bottleneck sometimes allows the population to move to a new evolutionary trajectory, but other times it constrains the future evolution of the population.”

“Near the end of the Permian, a large number of anomodont species existed that displayed a wide range of body sizes and ecological adaptations, including terrestrial plant eaters, amphibious hippo-like species, specialized burrowers, and even tree-dwelling forms,” said Dr. Kenneth Angielczyk. “The most successful group of anomodonts had canine-like tusks in their upper jaws and turtle-like beaks, and they were the most important terrestrial herbivores of their time.”

“The number of anomodont species increased during the Permian, sharply dropped during the end-Permian extinction event, and then rebounded in the Middle Triassic Period (about 240 million years ago) before the final extinction of the group at the end of the Triassic,” said Professor Jörg Fröbisch. “However, the variety of different anatomical features found in anomodonts, i.e. their anatomical diversity (also known as morphological disparity), declined steadily over their history. Even in the aftermath of the mass extinction, when there should have been a lot of empty ecological space, anomodonts did not evolve any fundamentally new features.” “This suggests that the evolutionary bottleneck they passed through during the extinction constrained their evolution during the recovery,” added Dr. Ruta.

Analyzing the response of animals and plants to this catastrophe helps us understand models of diversification and patterns of ecosystem reconstruction following large-scale biological crises. “This is the first study of its kind to address simultaneously changes in species number and anatomical diversity in anomodonts, and to quantify their response to the most catastrophic extinction on record. Anomodonts are abundant, diverse, and well studied, which makes them ideal models for evolutionary analyses,” said Professor Michael Benton. “The results underscore that recoveries from mass extinctions can be unpredictable, a finding that has important implications for the species extinctions being caused by human activity in the world today. We cannot just assume that life will return to the way it was before the disturbances.”

Shortening Tails Gave Early Birds a Leg Up

A radical shortening of their bony tails over 100 million years ago enabled the earliest birds to develop versatile legs that gave them an evolutionary edge, a new study shows.

A team led by Oxford University scientists examined fossils of the earliest birds from the Cretaceous Period, 145-66 million years ago, when early birds, such as Confuciusornis, Eoenantiornis, and Hongshanornis, lived alongside their dinosaur kin. At this point birds had already evolved powered flight, necessitating changes to their forelimbs, and the team investigated how this new lifestyle related to changes in their hind limbs (legs).

This image shows fossil birds from the time of dinosaurs [left image: Eoenatiornis, right image: Hongshanornis] showing they had diverse types of legs. (Credit: Roger Close)

This image shows fossil birds from the time of dinosaurs [left image: Eoenatiornis, right image: Hongshanornis] showing they had diverse types of legs. (Credit: Roger Close)

The team made detailed measurements of early bird fossils from all over the world including China, North America, and South America. An analysis of this data showed that the loss of their long bony tails, which occurred after flight had evolved, led to an explosion of diversity in the hind limbs of early birds, prefiguring the amazing variety of talons, stilts, and other specialised hind limbs that have helped to make modern birds so successful.A report of the research is published this week in Proceedings of the Royal Society B.

‘These early birds were not as sophisticated as the birds we know today — if modern birds have evolved to be like stealth bombers then these were more like biplanes,’ said Dr Roger Benson of Oxford University’s Department of Earth Sciences, who led the research. ‘Yet what surprised us was that despite some still having primitive traits, such as teeth, these early birds display an incredibly diverse array of versatile legs.’

By comparing measurements of the main parts of the legs of early birds — upper leg, shin, and foot — to those of their dinosaur relatives Dr Benson and co-author Dr Jonah Choiniere of the University of the Witwatersrand, South Africa, were able to determine whether bird leg evolution was exceptional compared to leg evolution in dinosaurs.

‘Our work shows that, whilst they may have started off as just another type of dinosaur, birds quickly made a rather special evolutionary breakthrough that gave them abilities and advantages that their dinosaur cousins didn’t have,’ said Dr Rogers. ‘Key to this special ‘birdness’ was losing the long bony dinosaur tail — as soon as this happened it freed up their legs to evolve to become highly versatile and adaptable tools that opened up new ecological niches.’

It was developing these highly versatile legs, rather than powered flight, that saw the evolutionary diversification of early birds proceed faster than was generally true of other dinosaurs.

Fossil of History’s Most Successful Mammal: Prehistoric ‘Rodent’ May Have Set the Stage for Life in Trees, Herbivorous Diets

The 160 million-year-old fossil of an extinct rodent-like creature from China is helping to explain how multituberculates — the most evolutionarily successful and long-lived mammalian lineage in the fossil record — achieved their dominance.

This fossil find — the oldest ancestor in the multituberculate family tree — represents a newly discovered species known as Rugosodon eurasiaticus. The nearly complete skeleton provides critical insights into the traits that helped such multituberculates thrive in their day. For example, the fossil reveals teeth that were adapted to gnawing plants and animals alike, as well as ankle joints that were highly adept at rotation.

The fossil of Rugosodon eurasiaticus is preserved in two shale slabs in part (left) and counterpart (right). It is about 17 cm (6.5 inches) long from head to rump, and is estimated to have weighed 80 grams (about 2.8 ounces). The sediments at the site of discovery are lake sediments with embedded volcanic layers. The fossil assemblage of Rugosodon also includes feathered dinosaur Anchiornis and the pterosaur Darwinopterus. By the dental features, Rugosodon eurasiaticus closely resembles the teeth of some multituberculate mammals of the Late Jurassic of the Western Europe, suggesting that Europe and Asia had extensive mammal faunal inter-changes in the Jurassic. (Credit: [Photographed by Zhe-Xi Luo of University of Chicago and Chongxi Yuan of Chinese Academy of Geological Sciences])

The fossil of Rugosodon eurasiaticus is preserved in two shale slabs in part (left) and counterpart (right). It is about 17 cm (6.5 inches) long from head to rump, and is estimated to have weighed 80 grams (about 2.8 ounces). The sediments at the site of discovery are lake sediments with embedded volcanic layers. The fossil assemblage of Rugosodon also includes feathered dinosaur Anchiornis and the pterosaur Darwinopterus. By the dental features, Rugosodon eurasiaticus closely resembles the teeth of some multituberculate mammals of the Late Jurassic of the Western Europe, suggesting that Europe and Asia had extensive mammal faunal inter-changes in the Jurassic. (Credit: [Photographed by Zhe-Xi Luo of University of Chicago and Chongxi Yuan of Chinese Academy of Geological Sciences])

In light of these findings, researchers suggest that R. eurasiaticus paved the way for later plant-eating and tree-dwelling mammals.Chong-Xi Yuan from the Chinese Academy of Geological Sciences in Beijing, China, along with Chinese and American colleagues, report their analysis of the fossil in the 16 August issue of Science.

The multituberculates flourished during the Cretaceous era, which ended over 60 million years ago. Much like today’s rodents, they filled an extremely wide variety of niches — below the ground, on the ground and in the trees — and this new fossil, which resembles a small rat or a chipmunk, possessed many of the adaptations that subsequent species came to rely upon, the researchers say.

“The later multituberculates of the Cretaceous [era] and the Paleocene [epoch] are extremely functionally diverse: Some could jump, some could burrow, others could climb trees and many more lived on the ground,” explained Zhe-Xi Luo, a co-author of the Science report. “The tree-climbing multituberculates and the jumping multituberculates had the most interesting ankle bones, capable of ‘hyper-back-rotation’ of the hind feet.”

“What is surprising about this discovery is that these ankle features were already present in Rugosodon — a land-dwelling mammal,” he said. (Such highly mobile ankle joints are normally associated with the foot functions of animals that are exclusively tree-dwellers — those that navigate uneven surfaces.)

Additionally, R. eurasiaticus could eat many different types of food, according to the researchers. The fossil — particularly its dentition, which reveals teeth designed for shearing plant matter — confirms a 2012 analysis of tooth types that suggested multituberculates consumed an animal-dominated diet for much of their existence, later diversifying to a plant-dominated one.

Multituberculates arose in the Jurassic period and went extinct in the Oligocene epoch, occupying a diverse range of habitats for more than 100 million years before they were out-competed by more modern rodents. By the end of their run on the planet, multituberculates had evolved complex teeth that allowed them to enjoy vegetarian diets and unique locomotive skills that enabled them to traverse treetops. Both adaptations helped them to become dominant among their contemporaries.

The fossilized R. eurasiaticus that Yuan and his team unearthed was preserved in lake sediments, suggesting that the creature may have lived on the shores. However, the researchers say that the ankle joints of this early multituberculate were already highly mobile and its teeth were already oriented for an omnivorous diet. Based on their findings, the researchers suggest that such adaptations must have arisen very early in the evolution of the order, setting the stage for the major diversification of rodent-like mammals that ensued.

The discovery of R. eurasiaticus also extends the distribution of certain multituberculates from Europe to Asia during the Late Jurassic period, the researchers say.

“This new fossil from eastern China is very similar to the Late Jurassic fossil teeth of multituberculates from Portugal in western Europe,” explained Dr. Luo. “This suggests that Rugosodon and its closely related multituberculates had a broad paleogreographic distribution and dispersals back-and-forth across the entire Eurasian continent.”

The report by Yuan et al. was supported by the Ministry of Land Resources and the Ministry of Science and technology of China; the Scientific Commission of Beijing; the Beijing Museum of Natural History; the National Science Foundation; Carnegie Museum; and the University of Chicago.

Slow Earthquakes May Foretell Larger Events

Monitoring slow earthquakes may provide a basis for reliable prediction in areas where slow quakes trigger normal earthquakes, according to Penn State geoscientists.

“We currently don’t have any way to remotely monitor when land faults are about to move,” said Chris Marone, professor of geophysics. “This has the potential to change the game for earthquake monitoring and prediction, because if it is right and you can make the right predictions, it could be big.”

Marone and Bryan Kaproth-Gerecht, recent Ph.D. graduate, looked at the mechanisms behind slow earthquakes and found that 60 seconds before slow stick slip began in their laboratory samples, a precursor signal appeared.

Scanning electron microscope images showing localized shear surfaces in cross-section and oblique view. Sense of shear is top to the right Note striations on shear surface. Similar patterns appear with serpentine. (Credit: Haines, S. H.; Kaproth, B.; Marone, C.; Saffer, D. and B. A. van der Pluijm)

Scanning electron microscope images showing localized shear surfaces in cross-section and oblique view. Sense of shear is top to the right Note striations on shear surface. Similar patterns appear with serpentine. (Credit: Haines, S. H.; Kaproth, B.; Marone, C.; Saffer, D. and B. A. van der Pluijm)

Normal stick slip earthquakes typically move at a rate of three to 33 feet per second, but slow earthquakes, while they still stick and slip for movement, move at rates of about 0.004 inches per second taking months or more to rupture. However, slow earthquakes often occur near traditional earthquake zones and may precipitate potentially devastating earthquakes.

“Understanding the physics of slow earthquakes and identifying possible precursory changes in fault zone properties are increasingly important goals,” the researchers report on line in today’s (Aug. 15) issue of Science Express.

Using serpentine, a common mineral often found in slow earthquake areas, Marone and Kaproth-Gerecht performed laboratory experiments applying shear stress to rock samples so that the samples exhibited slow stick slip movement. The researchers repeated experiments 50 or more times and found that, at least in the laboratory, slow fault zones undergo a transition from a state that supports slow velocity below about 0.0004 inches per second to one that essentially stops movement above that speed.

“We recognize that this is complicated and that velocity depends on the friction,” said Marone. “We don’t know for sure what is happening, but, from our lab experiments, we know that this phenomenon is occurring.”

The researchers think that what makes this unusual pattern of movement is that friction contact strength goes down as velocity goes up, but only for a small velocity range. Once the speed increases enough, the friction contact area becomes saturated. It can’t get any smaller and other physical properties take over, such as thermal effects. This mechanism limits the speed of slow earthquakes. Marone and Kaproth-Gerecht also looked at the primary elastic waves and the secondary shear waves produced by their experiments.

“Here we see elastic waves moving and we know what’s going on with P and S waves and the acoustic speed,” said Marone. “This is important because this is what you can see in the field, what seismographs record.”

Marone notes that there are not currently sufficient measuring devices adjacent to known fault lines to make any type of prediction from the precursor signature of the movement of the elastic waves. It is, however, conceivable that with the proper instrumentation, a better picture of what happens before a fault moves in slip stick motion is possible and perhaps could lead to some type of prediction.